Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866981.1_cds_XP_016432943.1_29140
CDS Infomation

[gene=LOC107759498] [db_xref=GeneID:107759498] [protein=pentatricopeptide repeat-containing protein At5g10690-like isoform X2] [protein_id=XP_016432943.1] [location=join(14275..14388,14518..14650,15183..15280,15391..15552,15661..15729,16092..16227,18686..18918,21346..21423,22488..22556,22939..23115,26036..26311)] [gbkey=CDS]
Sequence

ATGCAGGCTTGTGTTCATTGTGCTGATATAGAATCAGCTTTAAGGGTCTTTGATGAAATG
TCAGGCCCAGAAGGTTGTGGTGTTGATAATATCACTTATGCTACACTTCTAAAGGGTTTG
GGTGATGCCCGAAGAATTGATCAAGCATTTGAATTACTTGAAGCTATTGAACAAGGTACT
GCTGTTGGAAGTCCATACCTCTCGTCACCCCTTGTTAGTGGTCTGCTGAATTCTCTAATT
GAAGCAGGGGATCTACGCCGTGCTAATGGTCTTCTTGCACGATATGGTTATGTACTTCAC
GAGGGCGGATATCCATCCGTCTTGGTCTACAACTTATTGATGAAGGGGTACATAAGCACA
GGTTGTCCTGAGGCAGCGTTAAGTTTGCATGATGAAATACTAAGACATGGACTGAACCTG
GATAAGCTCGCATATAATAAACTAATCCTTGCATGTGTGGAGACTGGAAAGTTGGATGTT
GCAATGCAGTTCTTTGAGGACATGAAGGTCAGAGCACAAACTGTTGATGATGATGACGTT
TTCCCTGATGTAATCACCTATACTACGTTGCTAAAGGGTTTTGGTCATGCTCAGGATCTT
CTTTCGGTTCAAAGGATTGTCATAGAAATGAAATCATCCAACAACTTGCATATTGATCGA
GTTGCTTACACAGCAATCATCGATGCTTTCTTGAATTGTGGAACAATAAAAGGCGCTCTG
ACTGTGTATGGGGAACTAGTAAAGAGAGCTGGTGAAGGTTCTACCTTGAGGCCAAAGCCT
CATCTCTTCCTTGCTCTAATGCGGGCTTTTGCTGTCAGAGGAGAGTATGAAATGGTTAAA
AAGCTGCATGGACGCATGTGGCTGGATTCATCTGGAACAGTCACCTCTAAAGTTCATGAA
GAAGCTGATCATCTCCTAATGGAGGCAGCATTGAACAATGCGCAGTTGGATTTGGCCCTA
CAGTACATGAAAGGTATTATTGCGAAATGGAAGAAAATACCATGGGCTAGTCGAGGTGGA
ATGGTTGCTCTGCGGATTGAGGCATTACTTGGTTCCAGTGTTTCTATATTTAGCCCTTGC
ATATTGCCACAGGTGTCAGTACGTGATACTATCGAGCATATCATGGTGCCTTTTTCTGAA
GCAAGGCCACTGCAAGCAACCCTGAAACTGAAGCAAGTGGTCATGCGTTTCTTTAAGGAT
TCGATTGTTCCAGTTGTAGATGATTGGGGAAGTTGTGTTGGCATACTGCATCGTGAAGAC
TGCAATGAGCTGGATGCGCCACTTTCAGAAATGATGAGAAGTCCACCTCCTTCTGTAACA
ACCTCAACATCCATCGGTCGTGTTATTGATCTAATGCTAGAGAAGAGGTACAAAATGGTT
ATTGTTGCAAAATACGAAAATGTGCGGGGAATGTTTTACAGCTCCAGTGTAAGGGCTGTC
GGAGTTTTTACATCTGAACAGCTATATAAGCTTGCTCCAACCTCATCAGAGCTAGCTGTT
CAAAATTCTTCTGCTTGTAGAGAACCTATTGAAATATGTAGATAG

Peptide Sequence

PEP ID

XP_016432943.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g10690-like isoform X2 [Nicotiana tabacum]
Sequence

MQACVHCADIESALRVFDEMSGPEGCGVDNITYATLLKGLGDARRIDQAFELLEAIEQGT
AVGSPYLSSPLVSGLLNSLIEAGDLRRANGLLARYGYVLHEGGYPSVLVYNLLMKGYIST
GCPEAALSLHDEILRHGLNLDKLAYNKLILACVETGKLDVAMQFFEDMKVRAQTVDDDDV
FPDVITYTTLLKGFGHAQDLLSVQRIVIEMKSSNNLHIDRVAYTAIIDAFLNCGTIKGAL
TVYGELVKRAGEGSTLRPKPHLFLALMRAFAVRGEYEMVKKLHGRMWLDSSGTVTSKVHE
EADHLLMEAALNNAQLDLALQYMKGIIAKWKKIPWASRGGMVALRIEALLGSSVSIFSPC
ILPQVSVRDTIEHIMVPFSEARPLQATLKLKQVVMRFFKDSIVPVVDDWGSCVGILHRED
CNELDAPLSEMMRSPPPSVTTSTSIGRVIDLMLEKRYKMVIVAKYENVRGMFYSSSVRAV
GVFTSEQLYKLAPTSSELAVQNSSACREPIEICR

Transcript Sequence

Gene sequence data has not been registered.